Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907368.1_cds_XP_016457495.1_51216
CDS Infomation

[gene=LOC107781321] [db_xref=GeneID:107781321] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016457495.1] [location=join(64833..65779,66143..66791)] [gbkey=CDS]
Sequence

ATGGTTGCAGTATTCAACAAAGATCTTTTGAGTTGGTACCTCATTACCCTTAAGCTCAAA
GAAACAGTTGATGCTGGACTTCAAAATGCTCCTACTCCTACCACCAGCAGATCCATTGAA
TTTCCAGAACTGCCCCTGTTGCATAAAGAACAACATCAGCCATCTGATTCTTTGAAAGTT
ACTATTGAGGAAAATGCACCTATTTTAGAAGAGGATCCTAAATCACCGGAATCCGAATGG
GTAATTAGCATTAAGGAGAAATTAGAGCAAGCTAAGCAGGATAATGATGCTGGATCATGG
GCTAAACTTTCCATTTACAGAGTCCCCTTAAGCTTGCGCAAAGATGATGATAAAGCTTAT
ATTCCTCAAATTGTTTCTCTTGGTCCTTATCACCACGGCAAAAGACGCCTACGCAATATG
GATCGCCATAAATGGCGAGCCGTTTACCACATCCTCAAGCGGACAAATCAAGAAATTAAA
CTGCATTTTGATGCAGTAAGAGAGCTTGAAGAGAAAGCACGCGCTTGTTATGAAGGGAAT
ATTACAATGAGCAGCAATGAGTTTGTTGAAATGATGGTTCTTGACACTTGTTTTGTTCTT
GAGCTATTTCGTGGAGTTGCTGGTGGATTCAAGCATCTTGGTTATGCGAGGAATGATCCG
ATTTTCGCGATGCGCGGATCGATGCATTCTATACAGAGAGATATGATCATGATTGAGAAT
CAAATTCCATTATTTATTCTTGATCGGTTGTATGGGATTCAATCTGAAATGCCTGATGAG
AAAGGTGTTGTAGCAAGGTTAGCTTTAAGGTTCTTTGATCCATTGATGCCAACTGATGAG
CCATTGACACAGAGTGACTTGAACAAATTCAAGTCTTCTATGGGACGTTCTGCTTCTTTT
GATCCATTGGGAGACCTTGGTGGACTTCATTGCCTTGATGTTTTCAGGAGGAGCCTTTTG
CAGACAGGGCCTAAGCCAACACCTAGGACGTGGATCAAGCGTTGGTCACATTCGAATCGG
GTTGCAGACAAACGCAGGCAGCAGTTGATTCATTGTGTTTCGGAGCTAAAAGACGCTGGG
GTTAAGTTCAAGAAAAGGAAGACTGATCGGTTCTGGGACGTTAAATTTCAGAATGGAATC
CTCAAAATGCCTCGGCTTTTAATCCATGATGGTACAAAGTCACTTTTCCTCAACCTGATT
GCTTTTGAGCAGTGCCATCTTGACTGCACAAATGACATAACTTCGTACGTAATCTTCTTG
GACAACTTGATCGATTCGCCAGAGGATGTTAGTTACCTCCATTATTGTGGAATAATTGAG
CATTGGCTTGGTAATGACGCGGAAGTTGCTGACCTCTTCAATCGACTTTGTCAAGAGGTC
GTTTTCGACATCAATGACAGTTACCTTTCACAGTTATCTGACCAAATTAACAGGTACTAT
GACCATAGGTGGAATGCTTGGCGTGCTACTTTAAGCCACAAGTATTTCAACAACCCATGG
GCAATTATCTCCTTCATTGCTGCTGTTATTTTGATACTGTTCACCTTCGCACAAACGTTT
TATGGAGTCTATGGCTACTACAGACCACCTCAATAG

Peptide Sequence

PEP ID

XP_016457495.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MVAVFNKDLLSWYLITLKLKETVDAGLQNAPTPTTSRSIEFPELPLLHKEQHQPSDSLKV
TIEENAPILEEDPKSPESEWVISIKEKLEQAKQDNDAGSWAKLSIYRVPLSLRKDDDKAY
IPQIVSLGPYHHGKRRLRNMDRHKWRAVYHILKRTNQEIKLHFDAVRELEEKARACYEGN
ITMSSNEFVEMMVLDTCFVLELFRGVAGGFKHLGYARNDPIFAMRGSMHSIQRDMIMIEN
QIPLFILDRLYGIQSEMPDEKGVVARLALRFFDPLMPTDEPLTQSDLNKFKSSMGRSASF
DPLGDLGGLHCLDVFRRSLLQTGPKPTPRTWIKRWSHSNRVADKRRQQLIHCVSELKDAG
VKFKKRKTDRFWDVKFQNGILKMPRLLIHDGTKSLFLNLIAFEQCHLDCTNDITSYVIFL
DNLIDSPEDVSYLHYCGIIEHWLGNDAEVADLFNRLCQEVVFDINDSYLSQLSDQINRYY
DHRWNAWRATLSHKYFNNPWAIISFIAAVILILFTFAQTFYGVYGYYRPPQ

Transcript Sequence

Gene sequence data has not been registered.